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Intron Name: Anas_platyrhynchos_platyrhynchos_3_79941808_79942541_F

Intron Information:

Intron Rank:

130403

Intron Class:

major

Intron Phase:

Intron Coordinates:

79941808 - 79942541

Intron Length:

734

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTTTCTCTGAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

74.9

35.3

Major BPS

0.92

0.9

86.2

29.1

Major PPT

95.4

1.02

0.5

91.9

18.9

Minor 5ss

33.5

-1.9

3.4

47.6

Minor BPS

58.8

0.36

83.72

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020155

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040310

79941749 - 79953022

11274

ENSAPLT00000025040

79941749 - 79951491

9743