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Intron Name: Anas_platyrhynchos_platyrhynchos_3_7998718_8008882_R

Intron Information:

Intron Rank:

149070

Intron Class:

major

Intron Phase:

Intron Coordinates:

7998718 - 8008882

Intron Length:

10165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGTC

5'SS Class:

strong_major

3'SS Sequence:

GTCCTTGTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

CAGAGATGAAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

29.3

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

74.9

0.56

0.9

72.7

37.5

Minor 5ss

36.6

-1.5

3.4

45.2

Minor BPS

35.6

-1.1

2.1

38.14

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028947

7997452 - 8009248

11797