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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8016760_8021301_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8016760 - 8021301

Intron Length:

4542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TAATCCAAAAAA

Flanking Amino Acid:

PEDRMDRGRQAYGPGRPYPL

Intron Amino Acid Position:

853

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

78.7

29.9

Major BPS

84.4

0.85

34.5

Major PPT

81.9

0.72

0.8

77.2

37.1

Minor 5ss

38.9

-1.3

2.8

48.3

47.4

Minor BPS

48.7

-0.1

64.23

41.2

Associated Gene:

Gene:

XRN2

Ensembl Gene ID:

ENSAPLG00000013869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014515

8016697 - 8063286

46590