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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8021444_8026630_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8021444 - 8026630

Intron Length:

5187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

TCTCTCTTATAG

Flanking Amino Acid:

PTPLFQQTPQRTAGAAPLLA

Intron Amino Acid Position:

805

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

84.8

0.78

0.7

80.3

25.2

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

49.9

-0.1

1.8

57.54

43.9

Associated Gene:

Gene:

XRN2

Ensembl Gene ID:

ENSAPLG00000013869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014515

8016697 - 8063286

46590