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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8034201_8035495_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8034201 - 8035495

Intron Length:

1295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGACTC

5'SS Class:

strong_major

3'SS Sequence:

TTACGCATAATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TTACGCATAATA

Flanking Amino Acid:

HLDQSAFRTLGHTMPRERGM

Intron Amino Acid Position:

742

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

69.9

41.1

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

61.3

0.26

38.6

Minor 5ss

36.1

-1.6

3.2

43.6

Minor BPS

49.7

-0

66.88

39.3

Associated Gene:

Gene:

XRN2

Ensembl Gene ID:

ENSAPLG00000013869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014515

8016697 - 8063286

46590