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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8035631_8035728_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8035631 - 8035728

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATGTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTATTTTTAATG

Flanking Amino Acid:

VFKATVLPGAKKPPPVLKPG

Intron Amino Acid Position:

697

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

0.8

88.1

25.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.1

0.68

40.1

Minor 5ss

-0.9

2.8

55.1

35.9

Minor BPS

65.2

0.34

1.3

62.98

39.9

Associated Gene:

Gene:

XRN2

Ensembl Gene ID:

ENSAPLG00000013869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014515

8016697 - 8063286

46590