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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8040424_8041181_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8040424 - 8041181

Intron Length:

758

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TCATCTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTCCTCTGAACT

Flanking Amino Acid:

EVYPDLTPEENRRNSLGGDV

Intron Amino Acid Position:

596

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

87.4

26.6

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

0.72

0.8

80.9

30.8

Minor 5ss

41.1

-1

3.2

58.9

39.4

Minor BPS

0.64

1.4

82.07

39.1

Associated Gene:

Gene:

XRN2

Ensembl Gene ID:

ENSAPLG00000013869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014515

8016697 - 8063286

46590