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Intron Name: Anas_platyrhynchos_platyrhynchos_3_80420921_80421299_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
80420921 - 80421299

Intron Length:
379

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAC|GTAAGCATA

5'SS Class:
major

3'SS Sequence:
TGTTTGGTGGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTTAC

U12 Branch Point Sequence:
TTGTTTTTGTTT

Flanking Amino Acid:
QCKESKKDLITCPTPGCDGS

Intron Amino Acid Position:
721

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.5
0.6
1.3
78
38.6

Major BPS
73.7
0.59
0.9
63.6
35.1

Major PPT
69.4
0.44
1.1
65.2
45.5

Minor 5ss
44.3
-0.6
2.8
56.9
41

Minor BPS
44
-0.3
3.4
73.17
39

Associated Gene:

Gene:
MYT1L

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

80379389 - 80478407
99019

80396419 - 80478747
82329

80379389 - 80478407
99019