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Intron Name: Anas_platyrhynchos_platyrhynchos_3_80421363_80421870_F


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
80421363 - 80421870

Intron Length:
508

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGTGACTT

5'SS Class:
major

3'SS Sequence:
CCATGTCTTACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AACTTAC

U12 Branch Point Sequence:
ATTAACTTACTT

Flanking Amino Acid:
HVTGNYASHRSLSGCPLADK

Intron Amino Acid Position:
742

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.9
0.7
0.9
73.3
37.4

Major BPS
64.9
0.37
0.9
55.4
32.3

Major PPT
75.5
0.57
0.9
68.1
37.4

Minor 5ss
38.5
-1.3
3.3
56
48.1

Minor BPS
56.1
0.27
1.8
76.24
40.3

Associated Gene:

Gene:
MYT1L

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

80379389 - 80478407
99019

80379389 - 80478407
99019

80396419 - 80478747
82329