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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8053220_8053304_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8053220 - 8053304

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAATTTTT

5'SS Class:

major

3'SS Sequence:

TTGTATTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AGGTTTTTAATC

Flanking Amino Acid:

IYKNVVHKTGGYLTESGFVN

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

80.7

34.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.7

0.8

80.1

37.1

Minor 5ss

45.8

-0.4

2.8

59.1

45.4

Minor BPS

64.6

0.44

1.2

64.52

35.5

Associated Gene:

Gene:

XRN2

Ensembl Gene ID:

ENSAPLG00000013869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014515

8016697 - 8063286

46590