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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8053661_8053753_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8053661 - 8053753

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTGA

5'SS Class:

strong_major

3'SS Sequence:

GTGCGTGTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

ATGCACAAAACT

Flanking Amino Acid:

IFIRLCVLREYLERELTMAS

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

76.7

34.9

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

68.8

0.42

1.1

61.1

44.6

Minor 5ss

45.7

-0.5

2.5

58.5

Minor BPS

45.5

-0.2

2.1

66.15

43.8

Associated Gene:

Gene:

XRN2

Ensembl Gene ID:

ENSAPLG00000013869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014515

8016697 - 8063286

46590