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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8053829_8054237_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8053829 - 8054237

Intron Length:

409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTACTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TTGCCTTTTACT

Flanking Amino Acid:

QGLPREKQGKHDQFADSLPT

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

78.6

0.64

0.8

74.1

29.4

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

65.7

0.58

1.6

81.46

40.1

Associated Gene:

Gene:

XRN2

Ensembl Gene ID:

ENSAPLG00000013869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014515

8016697 - 8063286

46590