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Intron Name: Anas_platyrhynchos_platyrhynchos_3_80542242_80543592_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80542242 - 80543592

Intron Length:

1351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTCTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTTTTTACCA

Flanking Amino Acid:

IHATAYIIVQALPQFTVTPQ

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.6

12.4

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

84.6

0.78

0.6

81.1

Minor 5ss

36.2

-1.6

2.9

50.6

45.9

Minor BPS

71.5

0.67

1.5

82.25

33.1

Associated Gene:

Gene:

PXDN

Ensembl Gene ID:

ENSAPLG00000015757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016459

80536161 - 80579159

42999