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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8054759_8054861_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8054759 - 8054861

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACTTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTGTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

GGTTCGCTAAAT

Flanking Amino Acid:

KIMDYIRRQRAQPNHDPNTH

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

72.1

40.4

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

82.5

0.73

0.8

79.8

32.4

Minor 5ss

46.8

-0.3

2.9

64.1

47.4

Minor BPS

47.5

-0.1

2.4

72.06

43.9

Associated Gene:

Gene:

XRN2

Ensembl Gene ID:

ENSAPLG00000013869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014515

8016697 - 8063286

46590