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Intron Name: Anas_platyrhynchos_platyrhynchos_3_80548612_80551752_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80548612 - 80551752

Intron Length:

3141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGTGT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTCCTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

AACACCTTAATT

Flanking Amino Acid:

SSVSMVLSVNVPNVSRNGDP

Intron Amino Acid Position:

326

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

72.2

39.9

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

78.1

0.63

0.7

73.3

Minor 5ss

38.6

-1.3

3.4

52.7

46.4

Minor BPS

70.8

0.73

1.3

76.51

Associated Gene:

Gene:

PXDN

Ensembl Gene ID:

ENSAPLG00000015757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016459

80536161 - 80579159

42999