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Intron Name: Anas_platyrhynchos_platyrhynchos_3_80552461_80555018_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80552461 - 80555018

Intron Length:

2558

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTCAGTATT

5'SS Class:

major

3'SS Sequence:

CTTCTGGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

GAATCTTTGATT

Flanking Amino Acid:

DGLMVDLNGTSYHYNDLVSP

Intron Amino Acid Position:

415

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

1.3

84.6

33.2

Major BPS

0.85

0.9

39.9

Major PPT

79.5

0.66

0.9

76.2

37.8

Minor 5ss

38.8

-1.3

2.9

52.7

37.9

Minor BPS

66.4

0.6

1.2

73.16

37.8

Associated Gene:

Gene:

PXDN

Ensembl Gene ID:

ENSAPLG00000015757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016459

80536161 - 80579159

42999