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Intron Name: Anas_platyrhynchos_platyrhynchos_3_80557519_80560929_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80557519 - 80560929

Intron Length:

3411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTGA

5'SS Class:

strong_major

3'SS Sequence:

TGTGAGATTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTTTCTGTGAGA

Flanking Amino Acid:

TQFRRIRDGDRLWYENPGVF

Intron Amino Acid Position:

961

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

33.8

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

67.5

0.39

1.1

58.2

Minor 5ss

38.9

-1.2

2.9

49.9

46.3

Minor BPS

51.6

0.04

2.3

73.66

38.8

Associated Gene:

Gene:

PXDN

Ensembl Gene ID:

ENSAPLG00000015757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016459

80536161 - 80579159

42999