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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8055957_8056035_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8055957 - 8056035

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

CGTCACTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TCTTCCGTCACT

Flanking Amino Acid:

ERFDSNCITPGTEFMDNLAK

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

81.1

32.8

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

0.52

0.9

69.5

36.4

Minor 5ss

39.6

-1.2

2.9

41.2

Minor BPS

58.2

0.34

2.4

83.33

44.1

Associated Gene:

Gene:

XRN2

Ensembl Gene ID:

ENSAPLG00000013869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014515

8016697 - 8063286

46590