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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8056095_8057182_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8056095 - 8057182

Intron Length:

1088

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTATTGCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

ATGTCTTTATTG

Flanking Amino Acid:

QKIRQEILAKGGILPPEEVK

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

83.9

0.84

73.9

41.3

Major PPT

77.7

0.62

0.9

70.3

41.2

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

58.1

0.12

1.6

61.09

41.8

Associated Gene:

Gene:

XRN2

Ensembl Gene ID:

ENSAPLG00000013869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014515

8016697 - 8063286

46590