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Intron Name: Anas_platyrhynchos_platyrhynchos_3_80561139_80574163_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80561139 - 80574163

Intron Length:

13025

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTAATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TCTTGCTTAATT

Flanking Amino Acid:

DLRMWQDCCEDCRTRGQFNA

Intron Amino Acid Position:

1031

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

1.2

80.7

33.8

Major BPS

84.4

0.85

1.1

34.5

Major PPT

0.63

0.9

74.5

39.1

Minor 5ss

31.4

-2.1

2.4

35.4

40.5

Minor BPS

73.8

0.83

1.7

87.41

38.9

Associated Gene:

Gene:

PXDN

Ensembl Gene ID:

ENSAPLG00000015757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016459

80536161 - 80579159

42999