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Intron Name: Anas_platyrhynchos_platyrhynchos_3_80574285_80576870_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80574285 - 80576870

Intron Length:

2586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

CAATTTCTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

ATGGCATCAATT

Flanking Amino Acid:

LKKMKISKTVSSMKQSKYFR

Intron Amino Acid Position:

1071

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.1

0.99

0.7

83.1

30.9

Major BPS

67.6

0.44

1.2

Major PPT

79.4

0.66

0.9

73.4

36.5

Minor 5ss

29.6

-2.3

2.6

32.5

42.4

Minor BPS

48.9

-0

1.9

67.77

43.2

Associated Gene:

Gene:

PXDN

Ensembl Gene ID:

ENSAPLG00000015757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016459

80536161 - 80579159

42999