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Intron Name: Anas_platyrhynchos_platyrhynchos_3_80577004_80578318_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80577004 - 80578318

Intron Length:

1315

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

TTAATACTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

QKTISSLRNQIKKLESRLSK

Intron Amino Acid Position:

1116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

73.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.3

0.61

0.9

40.2

Minor 5ss

37.1

-1.5

3.3

50.2

46.4

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

PXDN

Ensembl Gene ID:

ENSAPLG00000015757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016459

80536161 - 80579159

42999