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Intron Name: Anas_platyrhynchos_platyrhynchos_3_80578433_80579036_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80578433 - 80579036

Intron Length:

604

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCGACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAGTAT

U12 Branch Point Sequence:

TTTTCCCGACAC

Flanking Amino Acid:

RDPCTVCECKVGQITCFVES

Intron Amino Acid Position:

1154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

84.6

33.2

Major BPS

0.05

1.4

43.5

Major PPT

70.8

0.47

0.9

65.1

35.3

Minor 5ss

41.1

-1

2.8

51.8

38.9

Minor BPS

-0.1

2.1

69.7

41.1

Associated Gene:

Gene:

PXDN

Ensembl Gene ID:

ENSAPLG00000015757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016459

80536161 - 80579159

42999