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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8058616_8058697_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8058616 - 8058697

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGGCAG

5'SS Class:

major

3'SS Sequence:

TTCTGTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

GTTAAATGAAAT

Flanking Amino Acid:

IIHPCTHPEDKPAPKNEDEM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

63.3

42.8

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

78.5

0.64

0.9

76.8

37.4

Minor 5ss

31.8

-2.1

3.3

38.8

40.7

Minor BPS

45.4

-0.2

67.03

42.1

Associated Gene:

Gene:

XRN2

Ensembl Gene ID:

ENSAPLG00000013869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014515

8016697 - 8063286

46590