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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8058826_8063211_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8058826 - 8063211

Intron Length:

4386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCCGG

5'SS Class:

major

3'SS Sequence:

TCTGCTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TCTGCTTTCACA

Flanking Amino Acid:

SIIVSCVEEKAKECNGVKAP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

50.6

47.7

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

80.8

0.69

0.8

75.3

33.1

Minor 5ss

30.4

-2.2

3.2

38.1

46.9

Minor BPS

58.8

0.27

1.9

70.26

42.8

Associated Gene:

Gene:

XRN2

Ensembl Gene ID:

ENSAPLG00000013869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014515

8016697 - 8063286

46590