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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8067706_8069961_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
8067706 - 8069961

Intron Length:
2256

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGAAAC

5'SS Class:
strong_major

3'SS Sequence:
TCTTCACTCGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTATAAT

U12 Branch Point Sequence:
TTTTTCTTCACT

Flanking Amino Acid:
KEFVTAIKSKAFWGISDVSS

Intron Amino Acid Position:
688

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
92.4
1
0.8
84.2
26.4

Major BPS
87.8
0.94
0.9
86.6
28.1

Major PPT
79.3
0.66
0.8
73.6
30.1

Minor 5ss
33.8
-1.8
2.9
42.8
44.4

Minor BPS
78.1
0.97
1.6
95.32
31.5

Associated Gene:

Gene:
KIZ

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8067605 - 8115336
47732

8067559 - 8115336
47778