Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_8070006_8078005_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8070006 - 8078005

Intron Length:

8000

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTATTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TTGTGCTGAATA

Flanking Amino Acid:

SSSERSGDLSRTGIRKEFVT

Intron Amino Acid Position:

673

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

72.8

39.1

Major BPS

81.6

0.78

0.8

24.9

Major PPT

87.9

0.85

0.8

80.4

37.1

Minor 5ss

39.7

-1.2

3.4

49.2

Minor BPS

58.9

0.28

1.9

71.97

40.6

Associated Gene:

Gene:

KIZ

Ensembl Gene ID:

ENSAPLG00000013782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034654

8067605 - 8115336

47732

ENSAPLT00000014367

8067559 - 8115336

47778