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Intron Name: Anas_platyrhynchos_platyrhynchos_3_80711292_80712575_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

80711292 - 80712575

Intron Length:

1284

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTACTGA

5'SS Class:

weak_major

3'SS Sequence:

ATCATATTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTCCTTTTAACA

Flanking Amino Acid:

LQRGRDHGLPGYNDWREFCG

Intron Amino Acid Position:

588

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.3

0.15

1.3

51.9

41.9

Major BPS

89.7

0.98

0.7

89.9

Major PPT

72.5

0.51

0.9

65.9

39.3

Minor 5ss

44.1

-0.6

2.8

56.7

47.4

Minor BPS

71.9

0.68

1.2

75.92

35.5

Associated Gene:

Gene:

TPO

Ensembl Gene ID:

ENSAPLG00000015727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016400

80702432 - 80744617

42186