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Intron Name: Anas_platyrhynchos_platyrhynchos_3_80713569_80721908_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80713569 - 80721908

Intron Length:

8340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGATGT

5'SS Class:

major

3'SS Sequence:

TCTTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATCAA

U12 Branch Point Sequence:

AAACACTGAATG

Flanking Amino Acid:

ARKIVGALHQIITLRDYIPK

Intron Amino Acid Position:

445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

68.5

39.2

Major BPS

66.7

0.42

1.1

69.7

35.6

Major PPT

93.5

0.98

0.6

92.3

18.1

Minor 5ss

32.8

-2

3.4

47.1

48.3

Minor BPS

46.8

-0.3

1.6

48.13

38.2

Associated Gene:

Gene:

TPO

Ensembl Gene ID:

ENSAPLG00000015727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016400

80702432 - 80744617

42186