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Intron Name: Anas_platyrhynchos_platyrhynchos_3_80728016_80730754_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80728016 - 80730754

Intron Length:

2739

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTAGAAAG

5'SS Class:

major

3'SS Sequence:

TTTCTTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TGTAATTTATTT

Flanking Amino Acid:

VRYNGVQLPLVREVTRKIIH

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.2

65.5

39.9

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

90.1

0.9

0.6

84.1

30.8

Minor 5ss

29.3

-2.4

2.6

30.4

36.2

Minor BPS

49.9

0.07

1.8

70.36

40.8

Associated Gene:

Gene:

TPO

Ensembl Gene ID:

ENSAPLG00000015727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016400

80702432 - 80744617

42186