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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8078103_8088149_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
8078103 - 8088149

Intron Length:
10047

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACAAGT

5'SS Class:
major

3'SS Sequence:
TTTTACTTAACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAA

U12 Branch Point Sequence:
TTTTACTTAACA

Flanking Amino Acid:
APQLDGTGKQGCDIGNDSSK

Intron Amino Acid Position:
641

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.7
0.68
1.1
75.5
40.6

Major BPS
90.4
1
0.7
90.2
19.3

Major PPT
81.8
0.72
0.9
77.7
35.1

Minor 5ss
40.7
-1
3
58.6
45.5

Minor BPS
85.5
1.11
1.3
92.79
26.1

Associated Gene:

Gene:
KIZ

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8067605 - 8115336
47732

8074785 - 8115336
40552

8067559 - 8115336
47778