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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8088313_8090792_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
8088313 - 8090792

Intron Length:
2480

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTTGGTTTT

5'SS Class:
major

3'SS Sequence:
TTTAATGCTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTTTTTTAATG

Flanking Amino Acid:
VSGKEVPDDQAPPLLREVLP

Intron Amino Acid Position:
587

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.9
0.64
1.2
79.9
36

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
76.6
0.6
1
70
41

Minor 5ss
41.1
-1
3.1
58.6
46

Minor BPS
78
0.74
1.1
78.3
32.8

Associated Gene:

Gene:
KIZ

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8067605 - 8115336
47732

8074785 - 8115336
40552

8067559 - 8115336
47778