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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8090962_8091444_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
8090962 - 8091444

Intron Length:
483

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACGTGGG

5'SS Class:
strong_major

3'SS Sequence:
TTGTGTTCCCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATCTGAG

U12 Branch Point Sequence:
TAGCTCCCATCT

Flanking Amino Acid:
CAARGAGEQSRPDLPQDVDV

Intron Amino Acid Position:
530

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.6
0.79
1
67.3
44.3

Major BPS
58.6
0.21
1.5
57.1
41.8

Major PPT
73.2
0.52
0.9
66.1
40.8

Minor 5ss
31
-2.2
3.3
40.6
45.6

Minor BPS
42.3
-0.5
2
59.56
43.3

Associated Gene:

Gene:
KIZ

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8067605 - 8115336
47732

8074785 - 8115336
40552

8067559 - 8115336
47778