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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8096361_8099056_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
8096361 - 8099056

Intron Length:
2696

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATGATGG

5'SS Class:
strong_major

3'SS Sequence:
TACTGTTCTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GAGTAAT

U12 Branch Point Sequence:
TGGTGGTTACTG

Flanking Amino Acid:
ISEEDQESIPGPQDGLSNGQ

Intron Amino Acid Position:
406

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81
0.73
1
65.1
41.6

Major BPS
58.9
0.22
1.4
61.7
43.1

Major PPT
79.2
0.66
0.9
73.2
36.9

Minor 5ss
43.4
-0.7
2.8
56.2
48

Minor BPS
40.3
-0.8
2.5
47.1
46.5

Associated Gene:

Gene:
KIZ

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8067559 - 8115336
47778

8067605 - 8115336
47732

8074785 - 8115336
40552