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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8099628_8104207_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
8099628 - 8104207

Intron Length:
4580

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAATGCGG

5'SS Class:
major

3'SS Sequence:
CTGTGTCTTCCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCTTAA

U12 Branch Point Sequence:
GTTTCCTTAAGC

Flanking Amino Acid:
RGDEEEYNKQNPWVVRPAGI

Intron Amino Acid Position:
216

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.5
0.6
1.1
57.1
47.2

Major BPS
69.7
0.49
1
59.9
38.5

Major PPT
78.4
0.64
0.9
69.2
41.8

Minor 5ss
30.2
-2.3
3.2
39.1
46

Minor BPS
77.6
0.85
1.6
83.37
36.3

Associated Gene:

Gene:
KIZ

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8067559 - 8115336
47778

8067605 - 8115336
47732

8074785 - 8115336
40552