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Intron Name: Anas_platyrhynchos_platyrhynchos_3_813351_824087_R

Intron Information:

Intron Rank:

137211

Intron Class:

major

Intron Phase:

Intron Coordinates:

813351 - 824087

Intron Length:

10737

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTATCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

CCCTTGTTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.6

32.8

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

83.6

0.76

0.8

77.5

36.5

Minor 5ss

30.6

-2.2

3.4

39.4

46.5

Minor BPS

46.1

-0.2

2.3

62.15

48.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040652

813103 - 825729

12627