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Intron Name: Anas_platyrhynchos_platyrhynchos_3_81485921_81486131_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

81485921 - 81486131

Intron Length:

211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGGCGC

5'SS Class:

major

3'SS Sequence:

TCTTTTTCCTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAT

U12 Branch Point Sequence:

GTGCCCTAATCT

Flanking Amino Acid:

GPPGLSTIVARTDWSEPWLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

55.2

43.9

Major BPS

69.6

0.49

1.1

69.5

Major PPT

84.5

0.78

0.6

84.9

22.8

Minor 5ss

26.1

-2.7

3.1

33.6

41.9

Minor BPS

50.1

0.08

70.17

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036145

81485665 - 81489024

3360

ENSAPLT00000034300

81485873 - 81489024

3152