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Intron Name: Anas_platyrhynchos_platyrhynchos_3_81604241_81605266_F

Intron Information:

Intron Rank:

131702

Intron Class:

major

Intron Phase:

Intron Coordinates:

81604241 - 81605266

Intron Length:

1026

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTATCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGGCTTTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.8

79.6

35.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

77.6

0.62

0.8

70.1

35.5

Minor 5ss

-1.8

2.8

39.3

40.3

Minor BPS

59.3

0.37

1.4

70.97

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043484

81603568 - 81605793

2226