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Intron Name: Anas_platyrhynchos_platyrhynchos_3_81675589_81678074_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

81675589 - 81678074

Intron Length:

2486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCTAC

U12 Branch Point Sequence:

TTCTGTCCAACA

Flanking Amino Acid:

YGGYQDEQRVEIVPRDLRMK

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

74.1

36.5

Major BPS

58.9

0.22

1.3

58.4

Major PPT

74.6

0.55

0.9

35.3

Minor 5ss

34.7

-1.7

2.9

41.5

39.2

Minor BPS

-0.3

2.2

63.87

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022612

81674355 - 81681080

6726