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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8219019_8221417_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8219019 - 8221417

Intron Length:

2399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

ATTTACTTACAG

Flanking Amino Acid:

ITLENSLKQKGNKSQREELD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

79.3

0.66

0.9

76.7

31.9

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

52.6

-0

64.33

Associated Gene:

Gene:

RALGAPA2

Ensembl Gene ID:

ENSAPLG00000013547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031801

8203326 - 8293213

89888

ENSAPLT00000047851

8203326 - 8293213

89888

ENSAPLT00000026457

8203326 - 8293213

89888

ENSAPLT00000047025

8203326 - 8293213

89888

ENSAPLT00000017294

8203326 - 8293213

89888

ENSAPLT00000040971

8203326 - 8293213

89888

ENSAPLT00000014143

8203326 - 8293213

89888

ENSAPLT00000038761

8203326 - 8293213

89888