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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8236823_8239910_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8236823 - 8239910

Intron Length:

3088

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTAATCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATTTTTCTAATC

Flanking Amino Acid:

IFYRWHFRSIASILKKLLHT

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.5

40.6

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

82.1

0.72

0.9

38.8

Minor 5ss

32.9

-2

2.9

40.4

45.3

Minor BPS

61.6

0.34

1.6

72.69

32.1

Associated Gene:

Gene:

RALGAPA2

Ensembl Gene ID:

ENSAPLG00000013547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038761

8203326 - 8293213

89888

ENSAPLT00000031801

8203326 - 8293213

89888

ENSAPLT00000047851

8203326 - 8293213

89888

ENSAPLT00000026457

8203326 - 8293213

89888

ENSAPLT00000047025

8203326 - 8293213

89888

ENSAPLT00000014143

8203326 - 8293213

89888

ENSAPLT00000040971

8203326 - 8293213

89888