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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8239955_8240833_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8239955 - 8240833

Intron Length:

879

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTCTC

5'SS Class:

major

3'SS Sequence:

CATCCCCTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTCTACAAAA

Flanking Amino Acid:

KLLHTGNSLKIRCEGIRLFL

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.2

68.8

42.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.6

0.51

0.8

66.1

29.6

Minor 5ss

51.5

0.05

2.4

70.5

39.9

Minor BPS

54.5

0.14

1.9

74.18

Associated Gene:

Gene:

RALGAPA2

Ensembl Gene ID:

ENSAPLG00000013547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038761

8203326 - 8293213

89888

ENSAPLT00000031801

8203326 - 8293213

89888

ENSAPLT00000047851

8203326 - 8293213

89888

ENSAPLT00000026457

8203326 - 8293213

89888

ENSAPLT00000047025

8203326 - 8293213

89888

ENSAPLT00000014143

8203326 - 8293213

89888

ENSAPLT00000040971

8203326 - 8293213

89888