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Intron Name: Anas_platyrhynchos_platyrhynchos_3_824175_829494_F

Intron Information:

Intron Rank:

144660

Intron Class:

major

Intron Phase:

Intron Coordinates:

824175 - 829494

Intron Length:

5320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGTAA

5'SS Class:

major

3'SS Sequence:

GTTTGTTTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

AATATCTGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.68

0.9

69.7

32.1

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

75.6

0.58

1.1

79.2

38.4

Minor 5ss

30.7

-2.2

3.2

43.2

Minor BPS

54.8

0.23

1.6

70.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027954

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017907

823939 - 829559

5621