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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8248588_8249465_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8248588 - 8249465

Intron Length:

878

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTATGGTAT

5'SS Class:

major

3'SS Sequence:

ATGTTTTTGAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAA

U12 Branch Point Sequence:

TGGTCACTAACT

Flanking Amino Acid:

DSSVQTDGKHLSSDHSGHKR

Intron Amino Acid Position:

469

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

70.3

35.9

Major BPS

65.6

0.39

0.9

55.4

32.7

Major PPT

64.4

0.33

1.2

67.3

42.4

Minor 5ss

46.9

-0.3

3.2

43.5

Minor BPS

58.4

0.34

79.2

42.2

Associated Gene:

Gene:

RALGAPA2

Ensembl Gene ID:

ENSAPLG00000013547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038761

8203326 - 8293213

89888

ENSAPLT00000026457

8203326 - 8293213

89888

ENSAPLT00000047851

8203326 - 8293213

89888

ENSAPLT00000017294

8203326 - 8293213

89888

ENSAPLT00000047025

8203326 - 8293213

89888

ENSAPLT00000014143

8203326 - 8293213

89888

ENSAPLT00000040971

8203326 - 8293213

89888