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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8249604_8250465_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8249604 - 8250465

Intron Length:

862

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGCTGT

5'SS Class:

major

3'SS Sequence:

GCCTGTCTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

ACTATTTAAACT

Flanking Amino Acid:

VKAGAQAALQVFLTNSANVF

Intron Amino Acid Position:

515

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

67.5

40.3

Major BPS

81.6

0.78

0.8

24.9

Major PPT

64.1

0.32

1.1

63.2

37.4

Minor 5ss

46.2

-0.4

2.8

64.5

46.9

Minor BPS

54.1

0.21

1.7

69.95

41.5

Associated Gene:

Gene:

RALGAPA2

Ensembl Gene ID:

ENSAPLG00000013547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026457

8203326 - 8293213

89888

ENSAPLT00000047025

8203326 - 8293213

89888

ENSAPLT00000017294

8203326 - 8293213

89888

ENSAPLT00000040971

8203326 - 8293213

89888

ENSAPLT00000014143

8203326 - 8293213

89888

ENSAPLT00000038761

8203326 - 8293213

89888

ENSAPLT00000031801

8203326 - 8293213

89888

ENSAPLT00000047851

8203326 - 8293213

89888