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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8264153_8264411_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8264153 - 8264411

Intron Length:

259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTGCTCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TGTAATAAAACA

Flanking Amino Acid:

LRIFASWLFKATTLPNEYKE

Intron Amino Acid Position:

1002

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.13

0.6

93.1

14.6

Major BPS

70.8

0.52

70.6

31.6

Major PPT

82.4

0.73

0.8

81.3

30.7

Minor 5ss

41.9

-0.9

2.9

57.8

46.8

Minor BPS

-0.4

58.92

40.3

Associated Gene:

Gene:

RALGAPA2

Ensembl Gene ID:

ENSAPLG00000013547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031801

8203326 - 8293213

89888

ENSAPLT00000047851

8203326 - 8293213

89888

ENSAPLT00000026457

8203326 - 8293213

89888

ENSAPLT00000047025

8203326 - 8293213

89888

ENSAPLT00000017294

8203326 - 8293213

89888

ENSAPLT00000040971

8203326 - 8293213

89888

ENSAPLT00000014143

8203326 - 8293213

89888

ENSAPLT00000038761

8203326 - 8293213

89888