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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8275660_8276934_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8275660 - 8276934

Intron Length:

1275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGCCA

5'SS Class:

major

3'SS Sequence:

TTTATCATTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TTTATTTTATCA

Flanking Amino Acid:

EIIAGSADVKCYLINILLKN

Intron Amino Acid Position:

1140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.68

65.6

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

80.9

0.69

0.8

78.9

34.1

Minor 5ss

30.4

-2.2

3.3

39.6

45.9

Minor BPS

63.2

0.41

1.6

75.3

36.3

Associated Gene:

Gene:

RALGAPA2

Ensembl Gene ID:

ENSAPLG00000013547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031801

8203326 - 8293213

89888

ENSAPLT00000047851

8203326 - 8293213

89888

ENSAPLT00000026457

8203326 - 8293213

89888

ENSAPLT00000047025

8203326 - 8293213

89888

ENSAPLT00000017294

8203326 - 8293213

89888

ENSAPLT00000040971

8203326 - 8293213

89888

ENSAPLT00000014143

8203326 - 8293213

89888

ENSAPLT00000038761

8203326 - 8293213

89888