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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8281957_8282240_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8281957 - 8282240

Intron Length:

284

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAACA

5'SS Class:

strong_major

3'SS Sequence:

AATATATTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

NDLGMNSWDRRKSFHILKKN

Intron Amino Acid Position:

1620

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

74.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.4

0.46

63.6

Minor 5ss

32.4

-2

3.1

40.9

45.1

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

RALGAPA2

Ensembl Gene ID:

ENSAPLG00000013547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014143

8203326 - 8293213

89888

ENSAPLT00000038761

8203326 - 8293213

89888

ENSAPLT00000031801

8203326 - 8293213

89888

ENSAPLT00000026457

8203326 - 8293213

89888

ENSAPLT00000047025

8203326 - 8293213

89888

ENSAPLT00000017294

8203326 - 8293213

89888

ENSAPLT00000040971

8203326 - 8293213

89888