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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8282313_8283297_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8282313 - 8283297

Intron Length:

985

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TATCTAATTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CCTATTTTAATT

Flanking Amino Acid:

RELKNLDSRQCRETHKIAVF

Intron Amino Acid Position:

1644

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

79.7

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.6

0.62

0.9

70.4

38.7

Minor 5ss

36.1

-1.6

3.1

47.2

42.9

Minor BPS

62.9

0.48

1.3

71.2

40.9

Associated Gene:

Gene:

RALGAPA2

Ensembl Gene ID:

ENSAPLG00000013547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031801

8203326 - 8293213

89888

ENSAPLT00000026457

8203326 - 8293213

89888

ENSAPLT00000047025

8203326 - 8293213

89888

ENSAPLT00000017294

8203326 - 8293213

89888

ENSAPLT00000040971

8203326 - 8293213

89888

ENSAPLT00000014143

8203326 - 8293213

89888

ENSAPLT00000038761

8203326 - 8293213

89888