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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8283422_8285618_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8283422 - 8285618

Intron Length:

2197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATAATC

5'SS Class:

strong_major

3'SS Sequence:

TTCAATCACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GTTCTTCTAATT

Flanking Amino Acid:

EDFVAGLGWEVDLSTHGGFM

Intron Amino Acid Position:

1686

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

80.9

31.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

64.8

0.33

0.9

62.9

38.3

Minor 5ss

38.1

-1.3

52.4

44.3

Minor BPS

55.8

0.26

1.6

74.39

36.4

Associated Gene:

Gene:

RALGAPA2

Ensembl Gene ID:

ENSAPLG00000013547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031801

8203326 - 8293213

89888

ENSAPLT00000047851

8203326 - 8293213

89888

ENSAPLT00000026457

8203326 - 8293213

89888

ENSAPLT00000047025

8203326 - 8293213

89888

ENSAPLT00000017294

8203326 - 8293213

89888

ENSAPLT00000040971

8203326 - 8293213

89888

ENSAPLT00000014143

8203326 - 8293213

89888

ENSAPLT00000038761

8203326 - 8293213

89888